Transcript: ENSDART00000140805.3 snap23.1-202

Description

synaptosome associated protein 23.1 [Source:ZFIN;Acc:ZDB-GENE-040426-883]

Location

Chromosome 17: 33,415,319-33,425,978 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 503 variant alleles and maps to 133 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000012874.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025501.9	snap23.1-201	1679	214aa	ENSDARP00000014467.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVE4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183169.1	snap23.1-205	4082	237aa	ENSDARP00000155545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2B5L7	-
ENSDART00000140805.3	snap23.1-202	988	216aa	ENSDARP00000113920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146447.3	snap23.1-203	708	169aa	ENSDARP00000114935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000169145.2	snap23.1-204	658	214aa	ENSDARP00000141382.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVE4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 988 bps, Translation length: 216 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000140805.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000140805.3 snap23.1-202

Summary

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Transcript: ENSDART00000140805.3 snap23.1-202

Summary

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