Transcript: ENSDART00000140739.2 lrrc4bb-203

Description

leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]

Gene Synonyms

si:ch1073-78f13.2

Location

About this transcript

This transcript has 6 exons, is annotated with 35 domains and features, is associated with 470 variant alleles and maps to 193 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000007208.8	lrrc4bb-201	2329	726aa	ENSDARP00000025492.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2A9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140739.2	lrrc4bb-203	2444	643aa	ENSDARP00000114092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC95	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132233.2	lrrc4bb-202	692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 2,444 bps, Translation length: 643 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000140739.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.