Transcript: ENSDART00000140691.2 si:ch211-167j6.3-203

Description

si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]

Location

About this transcript

This transcript has 5 exons, is associated with 11 variant alleles and maps to 44 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133135.3	si:ch211-167j6.3-201	871	169aa	ENSDARP00000117912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134415.2	si:ch211-167j6.3-202	502	113aa	ENSDARP00000115985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3B2I0	-
ENSDART00000140691.2	si:ch211-167j6.3-203	638	48aa	ENSDARP00000123089.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 638 bps, Translation length: 48 residues

Version

ENSDART00000140691.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.