Transcript: ENSDART00000140684.2 eif3ea-202

Description

eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]

Gene Synonyms

eIF3-p48, eif3s6, eif3s6a, fc55e01, wu:fc55e01, zgc:63821

Location

About this transcript

This transcript has 7 exons, is associated with 981 variant alleles and maps to 216 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126705.4	eif3ea-201	1589	446aa	ENSDARP00000106853.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DRI1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144651.2	eif3ea-204	471	157aa	ENSDARP00000116351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000140684.2	eif3ea-202	785	109aa	ENSDARP00000113319.1	Nonsense mediated decay	-	-
ENSDART00000141084.2	eif3ea-203	297	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000145794.2	eif3ea-205	193	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 785 bps, Translation length: 109 residues

Version

ENSDART00000140684.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.