Transcript: ENSDART00000140682.2 ANKS1B-203

Description

ankyrin repeat and sterile alpha motif domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-041210-349]

Location

Chromosome 4: 18,035,497-18,089,006 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1163 variant alleles and maps to 30 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003512.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133509.3	ANKS1B-201	5375	1280aa	ENSDARP00000117040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMU4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000169704.2	ANKS1B-205	4726	1281aa	ENSDARP00000131866.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IE55	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000140682.2	ANKS1B-203	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000143656.2	ANKS1B-202	510	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000144956.2	ANKS1B-204	453	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 536 bps,

Version

ENSDART00000140682.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000140682.2 ANKS1B-203

Summary

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Transcript: ENSDART00000140682.2 ANKS1B-203

Summary

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