Transcript: ENSDART00000140673.3 galnt1-202

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]

Gene Synonyms

fc05g08, si:ch211-194b7.3, wu:fc05g08

Location

About this transcript

This transcript has 13 exons, is annotated with 14 domains and features, is associated with 83 variant alleles and maps to 251 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140673.3	galnt1-202	4221	557aa	ENSDARP00000116122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FDA0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000087368.6	galnt1-201	1674	557aa	ENSDARP00000081802.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FDA0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 4,221 bps, Translation length: 557 residues

Version

ENSDART00000140673.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]