Transcript: ENSDART00000140661.3 si:ch73-103b9.2-202

Description

si:ch73-103b9.2 [Source:ZFIN;Acc:ZDB-GENE-070705-199]

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 6 variant alleles and maps to 254 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140661.3	si:ch73-103b9.2-202	1216	342aa	ENSDARP00000113174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WW45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144996.3	si:ch73-103b9.2-203	842	250aa	ENSDARP00000114834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WW44	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135601.2	si:ch73-103b9.2-201	750	228aa	ENSDARP00000116350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WW43	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,216 bps, Translation length: 342 residues

Version

ENSDART00000140661.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.