Transcript: ENSDART00000140543.3 zfyve26-202

Description

zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]

Gene Synonyms

spastizin, suf, wu:fc33a03, zspg15

Location

About this transcript

This transcript has 41 exons, is annotated with 32 domains and features, is associated with 964 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140543.3	zfyve26-202	7798	2552aa	ENSDARP00000115049.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NK88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000075953.5	zfyve26-201	8847	2551aa	ENSDARP00000070432.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q533	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 41, Coding exons: 40, Transcript length: 7,798 bps, Translation length: 2,552 residues

Version

ENSDART00000140543.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]