Transcript: ENSDART00000140520.2 SKP2-203

Description

S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]

Location

About this transcript

This transcript has 5 exons, is associated with 199 variant alleles and maps to 112 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101751.5	SKP2-204	2179	410aa	ENSDARP00000092527.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KP53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134320.3	SKP2-205	791	264aa	ENSDARP00000114755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000140520.2	SKP2-203	705	114aa	ENSDARP00000123198.1	Nonsense mediated decay	-	-
ENSDART00000136904.2	SKP2-201	553	85aa	ENSDARP00000120703.1	Nonsense mediated decay	-	-
ENSDART00000131624.2	SKP2-202	316	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 705 bps, Translation length: 114 residues

Version

ENSDART00000140520.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.