Transcript: ENSDART00000140457.4 OPN5-201

Description

opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]

Location

About this transcript

This transcript has 8 exons, is annotated with 37 domains and features, is associated with 757 variant alleles and maps to 196 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140457.4	OPN5-201	1516	352aa	ENSDARP00000122964.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RIV6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000021456.7	OPN5-202	1206	352aa	ENSDARP00000021281.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RIV6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 1,516 bps, Translation length: 352 residues

Version

ENSDART00000140457.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.