Transcript: ENSDART00000140435.3 mxra5a-203

Description

matrix-remodelling associated 5a [Source:ZFIN;Acc:ZDB-GENE-090312-22]

Gene Synonyms

mxra5, si:dkeyp-86f8.4

Location

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 8 variant alleles and maps to 33 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113486.4	mxra5a-201	10252	2516aa	ENSDARP00000097966.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPU8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137151.2	mxra5a-202	2831	943aa	ENSDARP00000113236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R062	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000140435.3	mxra5a-203	1007	228aa	ENSDARP00000123518.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QEM6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,007 bps, Translation length: 228 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000140435.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.