Transcript: ENSDART00000140432.4 PHYHD1-203

Description

phytanoyl-CoA dioxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-159]

Location

Chromosome 21: 4,508,959-4,524,915 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 4 domains and features, is associated with 404 variant alleles and maps to 98 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000029905.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147187.3	PHYHD1-201	1452	291aa	ENSDARP00000123099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U3U0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000025612.6	PHYHD1-204	1341	291aa	ENSDARP00000015072.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U3U0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140432.4	PHYHD1-203	1031	256aa	ENSDARP00000124422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000148910.3	PHYHD1-202	836	204aa	ENSDARP00000124739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,031 bps, Translation length: 256 residues

Version

ENSDART00000140432.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000140432.4 PHYHD1-203

Summary

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Transcript: ENSDART00000140432.4 PHYHD1-203

Summary

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