Transcript: ENSDART00000140430.2 SSX2IP-201

Description

synovial sarcoma, X breakpoint 2 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-050208-601]

Location

About this transcript

This transcript has 10 exons, is annotated with 6 domains and features, is associated with 127 variant alleles and maps to 162 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000088027.6	SSX2IP-202	1558	485aa	ENSDARP00000082460.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189054.1	SSX2IP-203	1461	478aa	ENSDARP00000146601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000140430.2	SSX2IP-201	1414	471aa	ENSDARP00000121501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,414 bps, Translation length: 471 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000140430.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.