Transcript: ENSDART00000140390.4 si:ch211-114l13.9-201

Description

si:ch211-114l13.9 [Source:ZFIN;Acc:ZDB-GENE-070424-116]

Location

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 672 variant alleles and maps to 134 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140390.4	si:ch211-114l13.9-201	1120	145aa	ENSDARP00000119259.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163761.2	si:ch211-114l13.9-202	1041	145aa	ENSDARP00000140418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMF8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,120 bps, Translation length: 145 residues

Version

ENSDART00000140390.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.