Transcript: ENSDART00000140375.3 zfyve27-202

Description

zinc finger, FYVE domain containing 27 [Source:ZFIN;Acc:ZDB-GENE-061013-502]

Gene Synonyms

im:7137347, zgc:153156

Location

About this transcript

This transcript has 12 exons, is annotated with 16 domains and features, is associated with 66 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140375.3	zfyve27-202	2621	409aa	ENSDARP00000113701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVN6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137352.2	zfyve27-201	914	140aa	ENSDARP00000119881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9A8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000141541.2	zfyve27-203	708	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,621 bps, Translation length: 409 residues

Version

ENSDART00000140375.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.