Transcript: ENSDART00000140313.2 TNFAIP8L1-201

Description

tumor necrosis factor, alpha-induced protein 8-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-695]

Location

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 570 variant alleles and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140313.2	TNFAIP8L1-201	4322	186aa	ENSDARP00000119527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SZE8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124889.2	TNFAIP8L1-202	2749	186aa	ENSDARP00000108146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SZE8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 4,322 bps, Translation length: 186 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7SZE8

Version

ENSDART00000140313.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.