Transcript: ENSDART00000140117.3 AOC3-202

Description

amine oxidase copper containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-133]

Gene Synonyms

aoc3, fa94a08, fe14c05, wu:fa94a08, wu:fe14c05, zgc:113006

Location

Chromosome 3: 32,924,185-32,927,516 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 26 domains and features, is associated with 147 variant alleles and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014646.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000140117.3	AOC3-202	2665	746aa	ENSDARP00000121793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000124160.3	AOC3-203	1513	223aa	ENSDARP00000105586.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189673.1	AOC3-204	673	223aa	ENSDARP00000145383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000121781.3	AOC3-201	866	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,665 bps, Translation length: 746 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000140117.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000140117.3 AOC3-202

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Transcript: ENSDART00000140117.3 AOC3-202

Summary

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