Transcript: ENSDART00000140028.2 LRRC4-201

Description

leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]

Location

About this transcript

This transcript has 2 exons, is annotated with 43 domains and features, is associated with 172 variant alleles and maps to 281 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140028.2	LRRC4-201	4108	858aa	ENSDARP00000122550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDQ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180812.1	LRRC4-204	1908	635aa	ENSDARP00000155625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000183740.1	LRRC4-205	1896	631aa	ENSDARP00000145289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000192342.1	LRRC4-203	1845	614aa	ENSDARP00000148001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000180017.1	LRRC4-202	1800	599aa	ENSDARP00000148662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 4,108 bps, Translation length: 858 residues

Version

ENSDART00000140028.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.