Transcript: ENSDART00000140019.3 capn2a-201

Description

calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]

Gene Synonyms

zgc:113590

Location

About this transcript

This transcript has 19 exons, is annotated with 28 domains and features, is associated with 864 variant alleles and maps to 219 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161950.3	capn2a-202	5407	698aa	ENSDARP00000132224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFK0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140019.3	capn2a-201	4462	596aa	ENSDARP00000114108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMV0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 4,462 bps, Translation length: 596 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000140019.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.