Transcript: ENSDART00000139989.3 plcd1a-203

Description

phospholipase C, delta 1a [Source:NCBI gene (formerly Entrezgene);Acc:555443]

Location

Chromosome 24: 20,372,576-20,392,950 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 392 variant alleles and maps to 29 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000059123.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000192909.1	plcd1a-205	5157	781aa	ENSDARP00000153856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000168751.3	plcd1a-204	5070	752aa	ENSDARP00000134776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGD7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000132340.3	plcd1a-202	2962	775aa	ENSDARP00000117474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000112349.3	plcd1a-201	2776	775aa	ENSDARP00000101132.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000139989.3	plcd1a-203	532	154aa	ENSDARP00000113394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 532 bps, Translation length: 154 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000139989.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000139989.3 plcd1a-203

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Transcript: ENSDART00000139989.3 plcd1a-203

Summary

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