Transcript: ENSDART00000139975.3 ATL3-201

Description

atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]

Location

Chromosome 14: 30,775,066-30,780,837 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 405 variant alleles and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000004270.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023054.10	ATL3-204	3594	513aa	ENSDARP00000012931.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CEM4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191666.1	ATL3-205	2066	518aa	ENSDARP00000155131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000186961.1	ATL3-206	1938	518aa	ENSDARP00000149203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000139552.4	ATL3-203	951	279aa	ENSDARP00000113120.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144921.3	ATL3-202	749	113aa	ENSDARP00000119766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139975.3	ATL3-201	739	165aa	ENSDARP00000113308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 739 bps, Translation length: 165 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000139975.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000139975.3 ATL3-201

Summary

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Transcript: ENSDART00000139975.3 ATL3-201

Summary

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