Transcript: ENSDART00000139965.3 CNOT2-201

Description

CCR4-NOT transcription complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070410-70]

Location

Chromosome 25: 28,679,672-28,693,276 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 409 variant alleles and maps to 79 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061802.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088383.7	CNOT2-204	2233	520aa	ENSDARP00000082816.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QN63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139965.3	CNOT2-201	693	173aa	ENSDARP00000112926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134072.2	CNOT2-202	566	110aa	ENSDARP00000117431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148366.2	CNOT2-203	563	188aa	ENSDARP00000118983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 693 bps, Translation length: 173 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000139965.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000139965.3 CNOT2-201

Summary

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Transcript: ENSDART00000139965.3 CNOT2-201

Summary

About Us

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