Transcript: ENSDART00000139920.2 senp7a-203

Description

SUMO specific peptidase 7a [Source:ZFIN;Acc:ZDB-GENE-070912-344]

Gene Synonyms

si:dkey-100n23.2

Location

Chromosome 9: 30,213,144-30,213,671 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 11 domains and features, is associated with 189 variant alleles and maps to 252 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000115136.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000190847.1	senp7a-204	1734	577aa	ENSDARP00000146138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q5A0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000139920.2	senp7a-203	528	175aa	ENSDARP00000112945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCQ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 528 bps, Translation length: 175 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000139920.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000139920.2 senp7a-203

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Transcript: ENSDART00000139920.2 senp7a-203

Summary

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