Transcript: ENSDART00000139904.3 kcnq5a-202

Description

potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]

Location

About this transcript

This transcript has 13 exons, is annotated with 50 domains and features, is associated with 2458 variant alleles and maps to 138 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000102232.5	kcnq5a-201	3353	973aa	ENSDARP00000093008.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000139904.3	kcnq5a-202	2790	929aa	ENSDARP00000118905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187472.1	kcnq5a-204	1353	432aa	ENSDARP00000155561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000146230.3	kcnq5a-203	518	173aa	ENSDARP00000121864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,790 bps, Translation length: 929 residues

Version

ENSDART00000139904.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.