Transcript: ENSDART00000139859.3 ITGA10-201

Description

integrin, alpha 10 [Source:ZFIN;Acc:ZDB-GENE-100922-54]

Location

About this transcript

This transcript has 31 exons, is annotated with 55 domains and features, is associated with 1335 variant alleles and maps to 158 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000139859.3	ITGA10-201	4494	1174aa	ENSDARP00000120150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186784.1	ITGA10-202	7886	1033aa	ENSDARP00000145332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000011224.10	ITGA10-203	7808	1007aa	ENSDARP00000013715.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 31, Coding exons: 30, Transcript length: 4,494 bps, Translation length: 1,174 residues

Version

ENSDART00000139859.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]