Transcript: ENSDART00000139744.2 SCAI-201

Description

suppressor of cancer cell invasion [Source:ZFIN;Acc:ZDB-GENE-060526-57]

Location

About this transcript

This transcript has 17 exons, is annotated with 9 domains and features, is associated with 1559 variant alleles and maps to 212 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000188482.1	SCAI-202	1827	608aa	ENSDARP00000145058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000139744.2	SCAI-201	1936	565aa	ENSDARP00000123265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CF54	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179879.1	SCAI-204	1767	588aa	ENSDARP00000153801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000186885.1	SCAI-203	1725	574aa	ENSDARP00000151231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000183061.1	SCAI-206	1413	470aa	ENSDARP00000147766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000182025.1	SCAI-205	1137	378aa	ENSDARP00000156535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 1,936 bps, Translation length: 565 residues

Version

ENSDART00000139744.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.