Transcript: ENSDART00000139738.3 TAF11L11-204

Description

TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]

Location

Chromosome 23: 309,063-313,319 forward strand.

About this transcript

This transcript has 6 exons, is associated with 326 variant alleles and maps to 199 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037855.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134556.3	TAF11L11-202	2842	206aa	ENSDARP00000121547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8KBY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000055152.4	TAF11L11-201	919	206aa	ENSDARP00000055151.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8KBY5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139738.3	TAF11L11-204	828	102aa	ENSDARP00000113280.1	Nonsense mediated decay	-	-
ENSDART00000142438.2	TAF11L11-203	886	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 828 bps, Translation length: 102 residues

Version

ENSDART00000139738.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000139738.3 TAF11L11-204

Summary

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Transcript: ENSDART00000139738.3 TAF11L11-204

Summary

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