Transcript: ENSDART00000139680.2 tns1b-203

Description

tensin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6933]

Gene Synonyms

fa11e05, si:ch211-148j1.1, tns1, wu:fa11e05

Location

About this transcript

This transcript has 2 exons, is associated with 144 variant alleles and maps to 84 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000015159.9	tns1b-201	5124	1707aa	ENSDARP00000023241.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q649	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134480.3	tns1b-202	2444	722aa	ENSDARP00000123231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJY1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000139680.2	tns1b-203	772	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000148129.2	tns1b-204	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 772 bps,

Version

ENSDART00000139680.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.