Transcript: ENSDART00000139622.2 med15-202

Description

mediator complex subunit 15 [Source:NCBI gene (formerly Entrezgene);Acc:406346]

Location

About this transcript

This transcript has 6 exons, is associated with 154 variant alleles and maps to 93 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000021997.10	med15-201	2751	802aa	ENSDARP00000003782.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFA9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140129.2	med15-203	489	138aa	ENSDARP00000122767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000139622.2	med15-202	643	48aa	ENSDARP00000115780.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 643 bps, Translation length: 48 residues

Version

ENSDART00000139622.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.