Transcript: ENSDART00000139606.2 snupn-202

Description

snurportin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3464]

Gene Synonyms

rnut1, wu:fc41a03, zgc:77819

Location

About this transcript

This transcript has 5 exons, is associated with 14 variant alleles and maps to 50 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000012820.8	snupn-201	1525	365aa	ENSDARP00000016305.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P5J9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180616.1	snupn-203	5063	365aa	ENSDARP00000156718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P5J9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139606.2	snupn-202	783	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 783 bps,

Version

ENSDART00000139606.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.