Transcript: ENSDART00000139604.2 HTR5A-201

Description

5-hydroxytryptamine (serotonin) receptor 5A, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-060531-129]

Location

Chromosome 2: 29,925,679-29,938,980 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 41 domains and features, is associated with 276 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000038869.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000163118.3	HTR5A-203	2919	345aa	ENSDARP00000134312.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFY3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180738.1	HTR5A-204	1227	345aa	ENSDARP00000151006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFY3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139604.2	HTR5A-201	1216	342aa	ENSDARP00000118260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000183800.1	HTR5A-202	1030	251aa	ENSDARP00000157034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,216 bps, Translation length: 342 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000139604.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000139604.2 HTR5A-201

Summary

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Transcript: ENSDART00000139604.2 HTR5A-201

Summary

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