Transcript: ENSDART00000139593.2 PCNX1-201

Description

pecanex 1 [Source:ZFIN;Acc:ZDB-GENE-081113-6]

Location

About this transcript

This transcript has 35 exons, is annotated with 80 domains and features, is associated with 30 variant alleles and maps to 136 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000139593.2	PCNX1-201	7868	2279aa	ENSDARP00000116424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000015664.10	PCNX1-205	6789	2262aa	ENSDARP00000006859.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000188301.1	PCNX1-202	6774	2257aa	ENSDARP00000155512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000191073.1	PCNX1-204	6738	2245aa	ENSDARP00000148695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000184192.1	PCNX1-203	6708	2235aa	ENSDARP00000157395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 35, Coding exons: 35, Transcript length: 7,868 bps, Translation length: 2,279 residues

Version

ENSDART00000139593.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.