Transcript: ENSDART00000139524.2 arl16-202

Description

ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 161 variant alleles and maps to 100 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082773.5	arl16-201	1304	177aa	ENSDARP00000077208.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAH7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139524.2	arl16-202	1166	177aa	ENSDARP00000115115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAH7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142200.2	arl16-203	737	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,166 bps, Translation length: 177 residues

Version

ENSDART00000139524.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.