Transcript: ENSDART00000139523.2 rabgap1l-203

Description

RAB GTPase activating protein 1-like [Source:ZFIN;Acc:ZDB-GENE-050208-389]

Gene Synonyms

si:ch211-197g15.12

Location

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 429 variant alleles and maps to 233 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139523.2	rabgap1l-203	2739	302aa	ENSDARP00000116752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVY3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000145769.3	rabgap1l-204	3181	475aa	ENSDARP00000122088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVY2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000088460.7	rabgap1l-201	3066	1021aa	ENSDARP00000082893.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDE9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135431.2	rabgap1l-202	640	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,739 bps, Translation length: 302 residues

Version

ENSDART00000139523.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.