Transcript: ENSDART00000139482.2 pqbp1-202

Description

polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]

Gene Synonyms

pqbp1l, si:dz150f13.4, zgc:92646

Location

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 645 variant alleles and maps to 131 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000049230.8	pqbp1-201	1054	261aa	ENSDARP00000049229.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DH51	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139482.2	pqbp1-202	938	261aa	ENSDARP00000113212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DH51	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 938 bps, Translation length: 261 residues

Version

ENSDART00000139482.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.