Transcript: ENSDART00000139479.3 SLC12A9-201

Description

solute carrier family 12 member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]

Location

About this transcript

This transcript has 15 exons, is annotated with 46 domains and features, is associated with 1189 variant alleles and maps to 225 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139479.3	SLC12A9-201	4466	899aa	ENSDARP00000120278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PY34 A2BFP5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000084917.5	SLC12A9-202	2987	899aa	ENSDARP00000079352.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PY34 A2BFP5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 15, Coding exons: 13, Transcript length: 4,466 bps, Translation length: 899 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A2BFP5

Version

ENSDART00000139479.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.