Transcript: ENSDART00000139477.2 trim110-201

Description

tripartite motif containing 110 [Source:ZFIN;Acc:ZDB-GENE-070912-10]

Gene Synonyms

si:ch211-10e2.3

Location

About this transcript

This transcript has 2 exons, is associated with 350 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143469.2	trim110-202	784	261aa	ENSDARP00000121863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7Y3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000146149.2	trim110-203	811	189aa	ENSDARP00000122351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QTX9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000139477.2	trim110-201	933	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 933 bps,

Version

ENSDART00000139477.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.