Transcript: ENSDART00000139465.2 robo1-202

Description

roundabout, axon guidance receptor, homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-3]

Location

About this transcript

This transcript has 2 exons, is associated with 1328 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000097134.6	robo1-201	7676	1687aa	ENSDARP00000087907.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2D2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142719.3	robo1-203	437	60aa	ENSDARP00000123319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CEN2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139465.2	robo1-202	350	31aa	ENSDARP00000123614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CEN3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 350 bps, Translation length: 31 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000139465.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.