Transcript: ENSDART00000139451.4 crybg1a-203

Description

crystallin beta-gamma domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-100]

Gene Synonyms

aim1a, im:7137367, si:ch73-374a13.2

Location

Chromosome 17: 25,481,466-25,550,249 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 106 domains and features, is associated with 2137 variant alleles and maps to 344 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000031782.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139451.4	crybg1a-203	10054	2843aa	ENSDARP00000115118.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAH5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000041721.6	crybg1a-201	8085	2694aa	ENSDARP00000041720.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QE29	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000132759.2	crybg1a-202	951	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 10,054 bps, Translation length: 2,843 residues

Version

ENSDART00000139451.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000139451.4 crybg1a-203

Summary

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Transcript: ENSDART00000139451.4 crybg1a-203

Summary

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