Transcript: ENSDART00000139448.3 GALNTL6-201

Description

polypeptide N-acetylgalactosaminyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-090312-115]

Location

About this transcript

This transcript has 13 exons, is annotated with 17 domains and features, is associated with 155 variant alleles and maps to 174 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139448.3	GALNTL6-201	3005	600aa	ENSDARP00000119502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A6C4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189756.1	GALNTL6-202	4214	600aa	ENSDARP00000150300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A6C4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183247.1	GALNTL6-203	2122	189aa	ENSDARP00000154423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 3,005 bps, Translation length: 600 residues

Version

ENSDART00000139448.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.