Transcript: ENSDART00000139407.3 ATPAF2-202

Description

ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]

Gene Synonyms

im:6893748

Location

Chromosome 12: 18,410,611-18,411,624 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 302 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000056270.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078724.6	ATPAF2-201	1445	291aa	ENSDARP00000073185.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KP55	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132956.2	ATPAF2-204	726	147aa	ENSDARP00000120415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145024.2	ATPAF2-205	996	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134297.2	ATPAF2-203	883	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139407.3	ATPAF2-202	748	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 748 bps,

Version

ENSDART00000139407.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000139407.3 ATPAF2-202

Summary

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Transcript: ENSDART00000139407.3 ATPAF2-202

Summary

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