Transcript: ENSDART00000139361.3 gpx4a-202

Description

glutathione peroxidase 4a [Source:ZFIN;Acc:ZDB-GENE-030410-2]

Location

About this transcript

This transcript has 6 exons, is associated with 284 variant alleles and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000099056.5	gpx4a-201	898	186aa	ENSDARP00000089830.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N2T9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183951.1	gpx4a-204	1282	112aa	ENSDARP00000152224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000144031.2	gpx4a-203	841	176aa	ENSDARP00000120856.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000139361.3	gpx4a-202	763	75aa	ENSDARP00000142217.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 763 bps, Translation length: 75 residues

Version

ENSDART00000139361.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.