Transcript: ENSDART00000139219.4 pnpla6-201

Description

patatin-like phospholipase domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050107-4]

Gene Synonyms

nte, wu:fy20f06

Location

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 103 variant alleles and maps to 85 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140890.4	pnpla6-202	7644	1342aa	ENSDARP00000122326.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R844	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139219.4	pnpla6-201	771	257aa	ENSDARP00000116275.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PC59	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000144735.2	pnpla6-203	638	212aa	ENSDARP00000123114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A657	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 771 bps, Translation length: 257 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000139219.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.