Transcript: ENSDART00000139188.3 SHANK3-202

Description

SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]

Location

Chromosome 18: 7,694,595-7,810,214 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 2468 variant alleles and maps to 25 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000063332.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000091805.6	SHANK3-205	4757	1509aa	ENSDARP00000086238.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139505.3	SHANK3-201	4060	1353aa	ENSDARP00000120237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000092456.6	SHANK3-204	3513	1170aa	ENSDARP00000086888.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000139188.3	SHANK3-202	707	185aa	ENSDARP00000117623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000151490.3	SHANK3-203	689	199aa	ENSDARP00000126274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 707 bps, Translation length: 185 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000139188.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000139188.3 SHANK3-202

Summary

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Transcript: ENSDART00000139188.3 SHANK3-202

Summary

About Us

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