Transcript: ENSDART00000139159.2 lnx2b-202

Description

ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]

Location

Chromosome 14: 32,926,385-32,927,726 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 283 variant alleles and maps to 193 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000071478.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105721.6	lnx2b-201	3150	678aa	ENSDARP00000096499.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4VCF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182867.1	lnx2b-204	2823	678aa	ENSDARP00000146281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4VCF7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187705.1	lnx2b-205	1165	123aa	ENSDARP00000155010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000139159.2	lnx2b-202	572	84aa	ENSDARP00000118069.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141561.2	lnx2b-203	394	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 572 bps, Translation length: 84 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000139159.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000139159.2 lnx2b-202

Summary

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Transcript: ENSDART00000139159.2 lnx2b-202

Summary

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