Transcript: ENSDART00000139141.3 C18H15orf48-204

Description

zgc:153317 [Source:ZFIN;Acc:ZDB-GENE-060825-309]

Location

Chromosome 18: 5,523,918-5,527,094 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 351 variant alleles and maps to 144 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000092903.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146209.3	C18H15orf48-202	717	86aa	ENSDARP00000112838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RE72	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132498.3	C18H15orf48-203	651	59aa	ENSDARP00000116790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000145400.2	C18H15orf48-201	266	50aa	ENSDARP00000116636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000139141.3	C18H15orf48-204	1824	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134228.2	C18H15orf48-205	840	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000142645.2	C18H15orf48-206	830	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,824 bps,

Version

ENSDART00000139141.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000139141.3 C18H15orf48-204

Summary

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Transcript: ENSDART00000139141.3 C18H15orf48-204

Summary

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