Transcript: ENSDART00000139091.4 GREB1-201

Description

growth regulating estrogen receptor binding 1 [Source:ZFIN;Acc:ZDB-GENE-070112-332]

Location

About this transcript

This transcript has 32 exons, is annotated with 26 domains and features, is associated with 1471 variant alleles and maps to 388 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139091.4	GREB1-201	6280	1840aa	ENSDARP00000115127.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182286.1	GREB1-204	7491	1875aa	ENSDARP00000147765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000076611.5	GREB1-202	914	217aa	ENSDARP00000071082.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000131670.2	GREB1-203	814	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 32, Coding exons: 31, Transcript length: 6,280 bps, Translation length: 1,840 residues

Version

ENSDART00000139091.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.