Transcript: ENSDART00000139033.2 lrp1bb-201

Description

low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]

Gene Synonyms

si:dkey-184d2.1

Location

About this transcript

This transcript has 87 exons, is annotated with 395 domains and features, is associated with 6423 variant alleles and maps to 195 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000176763.2	lrp1bb-202	13587	4528aa	ENSDARP00000143854.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y9K4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139033.2	lrp1bb-201	13370	4456aa	ENSDARP00000116076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6C6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 87, Coding exons: 87, Transcript length: 13,370 bps, Translation length: 4,456 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000139033.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.