Transcript: ENSDART00000139019.2 agr1-202

Description

anterior gradient 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7249]

Gene Synonyms

Ag1, DAg1, fl24a12, wu:fl24a12, zgc:165571

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 355 variant alleles and maps to 47 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000085763.7	agr1-201	821	168aa	ENSDARP00000080198.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8B0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180465.1	agr1-203	585	168aa	ENSDARP00000155834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8B0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139019.2	agr1-202	443	105aa	ENSDARP00000119506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEK9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 443 bps, Translation length: 105 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000139019.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.