Transcript: ENSDART00000139017.2 tmtopsb-202

Description

teleost multiple tissue opsin b [Source:ZFIN;Acc:ZDB-GENE-091118-50]

Location

About this transcript

This transcript has 4 exons, is annotated with 28 domains and features, is associated with 1302 variant alleles and maps to 83 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000185134.1	tmtopsb-203	3003	448aa	ENSDARP00000147895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q4C0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000038824.8	tmtopsb-201	1194	397aa	ENSDARP00000037563.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8N7XJ92	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139017.2	tmtopsb-202	777	259aa	ENSDARP00000121360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 777 bps, Translation length: 259 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000139017.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.